Publications

Publications from the sPARK research community. Filter by member authorship or year.

51–100 of 1202 publications

TitleYear

Deep Learning Enabled 3D Multi-Omic Analysis Reveals Molecular Signatures of Heterogeneous Response to Chemotherapy in Pancreatic Cancer

Forjaz A, Mojdeganlou H, Valentin A, Wetzel M, Lvovs D, Deshpande A, Shin SM, Piya S, et al.

bioRxiv

sPARK LabWungki ParkEileen O'Reilly
2026

Dual pancreatic carcinomas: clonally related or independent primaries?

Schoenfeld JD, Ravichandran V, Tarcan Z, Sahin-Ozkan H, Richards AL, Bilani N, Chou JF, O'Connor CA, et al.

NPJ Precis Oncol

sPARK LabWungki ParkEileen O'ReillyFiyinfolu Balogun
2026

Efficacy and safety of ASP3082 monotherapy or in combination with mFOLFIRINOX in patients (pts) with pancreatic ductal adenocarcinoma (PDAC).

A Kasi, CD Lopez, C Fountzilas, S Kitano, A Hollebecque, J Berlin, ...

Journal of Clinical Oncology 44 (2_suppl), 704-704

Wungki Park
2026

Efficacy and safety of cabozantinib (CABO) in advanced neuroendocrine tumors (NET) according to hormone functional status: Subgroup analysis of phase 3 CABINET trial (Alliance …

N Trikalinos, SM Geyer, T Zemla, JR Strosberg, EM Wolin, ...

Journal of Clinical Oncology 44 (16_suppl), 4178-4178

Eileen O'Reilly
2026

Efficacy and Safety of Ifosfamide and Mesna in Metastatic Castration-Resistant Prostate Cancer after Taxane-Based Chemotherapy and Novel Hormonal Therapy Failure

Kim CG, Ko YG, Yoon J, Lee C, Beom SH, Choi YD, Han WK, Ham WS, et al.

Cancer Res Treat

Daeseong Kim
2026

Endoscopic Ultrasound-Guided Biomarker Evaluation of Pancreatic Cancer After Exposure to Therapy

SE Lee, D Kim, V Rolston, E Vakiani, C Sigel, EM O'reilly, K Yu, ...

Endoscopy 58 (S 03), OP161

Eileen O'Reilly
2026

ESMO podcast on upper GI cancers: highlights in hepatocellular carcinoma and pancreatic cancer from ESMO 2025

J Dekervel, A Vogel, E O’Reilly

ESMO Gastrointestinal Oncology 11

Eileen O'Reilly
2026

Establishing the minimum future liver remnant volume for safe hepatectomy

JA Steinharter, J Chou, CH Ilagan, M Gönen, LV Saadat, K Soares, ...

Journal of the American College of Surgeons 242 (6), 1671

Eileen O'Reilly
2026

Evaluating the Prognostic Impact of IDH Mutations in Intrahepatic Cholangiocarcinoma

Harvey RN, Gelfer R, Drill E, Balachandran V, D'Angelica M, Drebin J, Kingham TP, Saadat L, et al.

JCO Precis Oncol

Eileen O'Reilly
2026

Evaluating the prognostic impact of IDH mutations in intrahepatic cholangiocarcinoma.

R Gelfer, R Harvey, EN Drill, VP Balachandran, MI D'Angelica, JA Drebin, ...

Journal of Clinical Oncology 44 (2_suppl), 598-598

Eileen O'Reilly
2026

Evaluation of progression-free survival as a surrogate endpoint for overall survival in localized pancreatic cancer: Trans-Atlantic Pancreatic Surgery Consortium Study

J Okui, MG Besselink, AC Wei, EM O’Reilly, BG Koerkamp, S Ceuppens, ...

Annals of Surgical Oncology, 1-9

Eileen O'Reilly
2026

Excellent 2-and 3-Year OS after Ablative MRgRT for Localized Pancreatic Cancer without Surgery

M Reyngold, V Kirichenko, E O'Reilly, M Mcmillan, AJ Wu, PB Romesser, ...

International Journal of Radiation Oncology* Biology* Physics 126 (1), S250-S251

Eileen O'Reilly
2026

Genomic and biomarker landscape of MTAP deficiency in gastrointestinal cancers.

R Thummalapalli, J Xu, N Tezcan, A Dhyani, OM Fitzpatrick, F Nagib, ...

Journal of Clinical Oncology 44 (16_suppl), 4175-4175

sPARK LabEileen O'ReillyWungki Park
2026

Genomic evolution of pancreatic cancer at single-cell resolution

Zhang H, Sashittal P, Karnoub ER, Jakatdar A, Umeda S, Hong J, Noronha AM, Cardenas A 3rd, et al.

Nat Genet

sPARK LabWungki ParkEileen O'Reilly
2026

Genomic landscape and clinical outcomes of MDM2 amplifications in biliary tract cancers.

F Nagib, S Nasir, A Dhyani, R Thummalapalli, DN Khalil, O Heffernan, ...

Journal of Clinical Oncology 44 (2_suppl), 589-589

Eileen O'Reilly
2026

Genomic predictors of pathologic response to hepatic artery infusion pump chemotherapy in colorectal liver metastases

N Nasar, JF Chou, J Datta, MT Evenhaim, M Gonen, KC Soares, ...

HPB

Eileen O'Reilly
2026

Germline Pathogenic Variants in Homologous Recombination Pathway Genes Are Frequent in Pancreatobiliary Ampullary Carcinoma

Misyura M, Selenica P, Ozcan K, Kemel Y, Basturk O, O'Reilly EM, Reis-Filho JS, Beets-Tan R, et al.

JCO Precis Oncol

Eileen O'Reilly
2026

Health-related quality of life (HRQOL) in the phase 3 trial of standard chemotherapy alone or combined with atezolizumab as adjuvant therapy for patients with stage III …

AC Dueck, B Fruth, AC Reinacher-Schick, W Peters, RJ Behrens, C Lieu, ...

Journal of Clinical Oncology 44 (16_suppl), 3626-3626

Eileen O'Reilly
2026

Hepatic artery infusion pump chemotherapy for unresectable intrahepatic cholangiocarcinoma: Pooled individual patient-level analysis of four clinical trials

M Rousian, R Alessandris, L Schleimer, H Kalvin, O Zaki, L Connell, ...

Journal of Hepatology

Eileen O'Reilly
2026

IL10R Inhibition Induces Neutrophil Tumoricidal Activity

Khalil DN, Gomez R, Regev A, Samaan F, Marouf Y, Budhu S, Hirschhorn D, Schulze I, et al.

Cancer Immunol Res

sPARK LabWungki ParkEileen O'Reilly
2026

Image registration improves inter-reader agreement of objective response in CT assessment of pancreas adenocarcinoma

JS Heiselman, N Horvat, M El Homsi, B Agridag-Ucpinar, O Yildirim, ...

European journal of radiology, 112776

Eileen O'Reilly
2026

Impact of UGT1A1*28 polymorphism in patients with metastatic pancreatic ductal adenocarcinoma treated with NALIRIFOX in the NAPOLI 3 trial

Abdelrahim M, Khan G, Hatoum H, Zervoudakis A, Dayyani F, Zhang L, Li J, Maxwell F, et al.

Future Oncol

Eileen O'Reilly
2026

Investigating Age-Related Differences in Survival Outcomes and Mutation Status of Patients with Intrahepatic Cholangiocarcinoma: M. Armstrong et al.

M Armstrong, H Kalvin, M Gönen, G Abou-Alfa, VP Balachandran, ...

Annals of Surgical Oncology, 1-11

Eileen O'Reilly
2026

Invigorating pre-existing tumor-infiltrating expandable (TIE) T cell clonotypes in exceptional responders with dual PARP-PD-1 blockade in homologous recombination deficient …

M Hilmi, W Mckerrow, JD Schoenfeld, S Umeda, N Tezcan, C O'Connor, ...

CANCER RESEARCH 86 (8)

Eileen O'Reilly
2026

Lycopene and survival in patients with stage III colon cancer: Findings from CALGB (Alliance)/SWOG 80702.

S Lee, Q Shi, C Ma, P Kumar, F Couture, JP Kuebler, SS Krishnamurthi, ...

Journal of Clinical Oncology 44 (16_suppl), 3630-3630

Eileen O'Reilly
2026

Maximal Ablative Irradiation Because of Encasement for Patients With Locally Advanced Pancreatic Cancer: A Nonrandomized Clinical Trial

Reyngold M, Wei AC, O'Reilly EM, D'Angelica MI, Kingham TP, Soares KC, Varghese AM, White C, et al.

JAMA Surg

sPARK LabWungki ParkEileen O'ReillyFiyinfolu Balogun
2026

Molecular and Clinical Determinants of Targeted Therapy Treatment in Biliary Tract Cancer

Cowzer D, Walch H, Atri P, Shah F, Huq R, Thummalapalli R, Nagib F, Varghese A, et al.

Clin Cancer Res

sPARK LabWungki ParkEileen O'Reilly
2026

Molecular determinants of outcome to gemcitabine, cisplatin, and nab-paclitaxel in patients with advanced biliary tract cancer

Kim D, Sim NS, Woo S, Kim MH, Lee CK, Hong SS, Kim SH, Hwang HK, Kang CM, Lee WJ, Jo JH, Chung T, Hwang S, Kang B, Kim JS, Kwon CI, Kim S, Chon HJ, Kim CG, Park YN, Choi HJ

Clinical and Molecular Hepatology 32(2), 721–736

Daeseong Kim
2026

Mucinous histology and resistance to immune checkpoint blockade in patients with microsatellite instability-high metastatic colorectal cancer

Nasca V, Ambrosini M, Taieb J, Cohen R, Lonardi S, Boursi B, Margalit O, Salvatore L, et al.

Oncologist

Vincenzo Nasca
2026

Multimodal Machine Learning for Predicting Outcomes in the PASS-01 Trial of Systemic Therapy for Metastatic Pancreatic Cancer

W Quan, D Henault, A Zhang, GH Jang, SM Hasnain, D Bevacqua, ...

medRxiv, 2026.08. 24.26360900

Eileen O'Reilly
2026

Mutant allele copy number gains define distinct molecular subtypes of oncogene-driven cancers and are associated with response to allele-specific KRAS G12C inhibitor sotorasib …

MA Perry, AL Richards, A Price, SE Tischfield, H Walch, H Xie, ...

CANCER RESEARCH 86 (5)

Eileen O'Reilly
2026

Myofibroblasts Induce Neuroplasticity to Promote Pancreatic Inflammation and Cancer Progression

Nigri J, Lan W, Fung ML, Kayser C, Deschênes A, Hinds J, Kaushalya S, Pawlak SA, et al.

Cancer Discov

sPARK LabWungki ParkMarc Hilmi
2026

NALIRIFOX versus nab-paclitaxel and gemcitabine in older patients with treatment-naive metastatic pancreatic cancer: a subgroup analysis of the pivotal NAPOLI 3 trial

T Macarulla, RP Cid, MS Womack, AC Gracian, A Zervoudakis, H Hatoum, ...

ESMO open 11 (3), 106043

Eileen O'Reilly
2026

Neoantigen-reactive CD8+ T cell engagement marks exceptional survivors of pancreatic cancer

M Hilmi, JD Schoenfeld, W McKerrow, Y Elhanati, CA O'Connor, S Umeda, ...

bioRxiv, 2026.09. 17.752426

sPARK LabEileen O'ReillyWungki ParkFiyinfolu Balogun
2026

NRG1 fusion-positive solid tumors: clinical detection, genomic landscape, and real-world data in pancreatic cancer

Schram AM, Yang SR, Kahn G, Velasco R, Repetto M, Kinh Gian Do R, DiNapoli S, Sukhadia P, et al.

J Natl Cancer Inst

Eileen O'Reilly
2026

Oncogene Mutations: The Shared Antigen Vaccines That Work?

R Paredes, SD Haldar, S Pant, EM O'Reilly

Annual Review of Medicine 77

Eileen O'Reilly
2026

Organotropic and genomic characterization of pancreatic neuroendocrine carcinoma.

S Wallam, CJ Kinslow, R Thummalapalli, AA Wallam, DP Horowitz, ...

Journal of Clinical Oncology 44 (16_suppl), 4172-4172

sPARK LabEileen O'ReillyWungki Park
2026

Outcomes of First Versus Second-Line Hepatic Artery Infusion Chemotherapy in Unresectable Intrahepatic Cholangiocarcinoma

Nasar N, Armstrong M, Chou JF, Gonen M, Soares KC, Balachandran VP, Drebin JA, Kingham TP, et al.

Ann Surg Oncol

sPARK LabWungki ParkEileen O'Reilly
2026

Pancreatic cancer

Roth S, Apte M, Balachandran VP, Biffi G, Conroy T, Cukierman E, Dotan E, Esposito I, et al.

Nat Rev Dis Primers

Eileen O'Reilly
2026

Pancreatic Cancer—Advances in the Last 50 Years

SG Barreto, A Maitra, EM O'Reilly, D Sahani, R Zheng, CJ Yeo

World journal of surgery

Eileen O'Reilly
2026

Pancreatic cancer: advances in immunology, translational analyses and therapeutic paradigms

O'Reilly EM

Nat Rev Gastroenterol Hepatol

Eileen O'Reilly
2026

Pancreatic cancer: advances in immunology, translational analyses and therapeutic paradigms: Pancreatic cancer in 2025

EM O’Reilly

Nature Reviews Gastroenterology & Hepatology 23 (2), 115-116

Eileen O'Reilly
2026

Pancreatic Cancer: Translating Tumor Biology into Actionability

Balogun FO, Sherman MH, Park W, Soares KC, Reyngold M, Schoenfeld JD, Singhal A, Iacobuzio-Donahue CA, et al.

Cancer Discov

sPARK LabWungki ParkEileen O'ReillyFiyinfolu BalogunJoshua Schoenfeld
2026

Pembrolizumab and olaparib in homologous-recombination-deficient metastatic pancreatic cancer: the phase 2 POLAR trial

W Park, CA O’Connor, JF Chou, M Hilmi, Z Tarcan, C Schwartz, M Larsen, ...

Nature Medicine, 1-11

sPARK LabEileen O'ReillyWungki ParkFiyinfolu Balogun
2026

Pembrolizumab and Olaparib in HRD Metastatic Pancreatic Cancer: The POLAR Trial

Park W (Corresponding Author), O’Reilly E, et al.

Nature Medicine

sPARK LabWungki ParkEileen O'ReillyFiyinfolu BalogunJoshua SchoenfeldMarc HilmiCatherine O'Connor
2026

Phase 1 evaluation of ASP3082, a first-in-class selective protein degrader, in patients (pts) with KRAS G12D-mutant pancreatic ductal adenocarcinoma (PDAC …

W Park, A Kasi, JW Goldman, M Pelster, B Herzberg, AW Tolcher, AI Spira, ...

Journal of Clinical Oncology 44 (2_suppl), 775-775

Wungki Park
2026

Physical activity and molecular residual disease in stage III colon cancer: Findings from Cancer and Leukemia Group B (Alliance)/SWOG 80702

GQ Zhang, C Ma, VB Yang, Q Shi, JA Nowak, L Pederson, T Twombly, ...

JNCI: Journal of the National Cancer Institute, djag342

Eileen O'Reilly
2026

POLQ-driven repair scars shape the immunogenic landscape of homologous recombination-deficient pancreatic cancer

Park W, Umeda S, Hilmi M, O'Connor C, Sharma R, Tezcan N, Zhang H, Zhu Y, et al.

bioRxiv

sPARK LabWungki ParkEileen O'ReillyFiyinfolu BalogunMarc HilmiCatherine O'Connor
2026

Precision Medicine in Pancreatic Cancer: Targeting KRAS and Beyond

Schürmann H, Park W, O'Kane GM, Sciortino C, Niger M, Reichert M, Olive KP, Pretzell I, et al.

Target Oncol

Wungki Park
2026

Precision oncology in pancreatic cancer and future treatment directions

L Al Mahmasani, EM O’Reilly

Surgical Oncology Clinics 35 (1), 145-166

Eileen O'Reilly
2026