Publications

Publications from the sPARK research community. Filter by member authorship or year.

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Genomic and biomarker landscape of MTAP deficiency in gastrointestinal cancers.

R Thummalapalli, J Xu, N Tezcan, A Dhyani, OM Fitzpatrick, F Nagib, ...

Journal of Clinical Oncology 44 (16_suppl), 4175-4175

sPARK LabEileen O'ReillyWungki Park
2026

Genomic evolution of pancreatic cancer at single-cell resolution

Zhang H, Sashittal P, Karnoub ER, Jakatdar A, Umeda S, Hong J, Noronha AM, Cardenas A 3rd, et al.

Nat Genet

sPARK LabWungki ParkEileen O'Reilly
2026

Genomic landscape and clinical outcomes of MDM2 amplifications in biliary tract cancers.

F Nagib, S Nasir, A Dhyani, R Thummalapalli, DN Khalil, O Heffernan, ...

Journal of Clinical Oncology 44 (2_suppl), 589-589

Eileen O'Reilly
2026

Genomic predictors of pathologic response to hepatic artery infusion pump chemotherapy in colorectal liver metastases

N Nasar, JF Chou, J Datta, MT Evenhaim, M Gonen, KC Soares, ...

HPB

Eileen O'Reilly
2026

Germline Pathogenic Variants in Homologous Recombination Pathway Genes Are Frequent in Pancreatobiliary Ampullary Carcinoma

Misyura M, Selenica P, Ozcan K, Kemel Y, Basturk O, O'Reilly EM, Reis-Filho JS, Beets-Tan R, et al.

JCO Precis Oncol

Eileen O'Reilly
2026

Health-related quality of life (HRQOL) in the phase 3 trial of standard chemotherapy alone or combined with atezolizumab as adjuvant therapy for patients with stage III …

AC Dueck, B Fruth, AC Reinacher-Schick, W Peters, RJ Behrens, C Lieu, ...

Journal of Clinical Oncology 44 (16_suppl), 3626-3626

Eileen O'Reilly
2026

Hepatic artery infusion pump chemotherapy for unresectable intrahepatic cholangiocarcinoma: Pooled individual patient-level analysis of four clinical trials

M Rousian, R Alessandris, L Schleimer, H Kalvin, O Zaki, L Connell, ...

Journal of Hepatology

Eileen O'Reilly
2026

IL10R Inhibition Induces Neutrophil Tumoricidal Activity

Khalil DN, Gomez R, Regev A, Samaan F, Marouf Y, Budhu S, Hirschhorn D, Schulze I, et al.

Cancer Immunol Res

sPARK LabWungki ParkEileen O'Reilly
2026

Image registration improves inter-reader agreement of objective response in CT assessment of pancreas adenocarcinoma

JS Heiselman, N Horvat, M El Homsi, B Agridag-Ucpinar, O Yildirim, ...

European journal of radiology, 112776

Eileen O'Reilly
2026

Impact of UGT1A1*28 polymorphism in patients with metastatic pancreatic ductal adenocarcinoma treated with NALIRIFOX in the NAPOLI 3 trial

Abdelrahim M, Khan G, Hatoum H, Zervoudakis A, Dayyani F, Zhang L, Li J, Maxwell F, et al.

Future Oncol

Eileen O'Reilly
2026

Investigating Age-Related Differences in Survival Outcomes and Mutation Status of Patients with Intrahepatic Cholangiocarcinoma: M. Armstrong et al.

M Armstrong, H Kalvin, M Gönen, G Abou-Alfa, VP Balachandran, ...

Annals of Surgical Oncology, 1-11

Eileen O'Reilly
2026

Invigorating pre-existing tumor-infiltrating expandable (TIE) T cell clonotypes in exceptional responders with dual PARP-PD-1 blockade in homologous recombination deficient …

M Hilmi, W Mckerrow, JD Schoenfeld, S Umeda, N Tezcan, C O'Connor, ...

CANCER RESEARCH 86 (8)

Eileen O'Reilly
2026

Lycopene and survival in patients with stage III colon cancer: Findings from CALGB (Alliance)/SWOG 80702.

S Lee, Q Shi, C Ma, P Kumar, F Couture, JP Kuebler, SS Krishnamurthi, ...

Journal of Clinical Oncology 44 (16_suppl), 3630-3630

Eileen O'Reilly
2026

Maximal Ablative Irradiation Because of Encasement for Patients With Locally Advanced Pancreatic Cancer: A Nonrandomized Clinical Trial

Reyngold M, Wei AC, O'Reilly EM, D'Angelica MI, Kingham TP, Soares KC, Varghese AM, White C, et al.

JAMA Surg

sPARK LabWungki ParkEileen O'ReillyFiyinfolu Balogun
2026

Molecular and Clinical Determinants of Targeted Therapy Treatment in Biliary Tract Cancer

Cowzer D, Walch H, Atri P, Shah F, Huq R, Thummalapalli R, Nagib F, Varghese A, et al.

Clin Cancer Res

sPARK LabWungki ParkEileen O'Reilly
2026

Multimodal Machine Learning for Predicting Outcomes in the PASS-01 Trial of Systemic Therapy for Metastatic Pancreatic Cancer

W Quan, D Henault, A Zhang, GH Jang, SM Hasnain, D Bevacqua, ...

medRxiv, 2026.08. 24.26360900

Eileen O'Reilly
2026

Mutant allele copy number gains define distinct molecular subtypes of oncogene-driven cancers and are associated with response to allele-specific KRAS G12C inhibitor sotorasib …

MA Perry, AL Richards, A Price, SE Tischfield, H Walch, H Xie, ...

CANCER RESEARCH 86 (5)

Eileen O'Reilly
2026

NALIRIFOX versus nab-paclitaxel and gemcitabine in older patients with treatment-naive metastatic pancreatic cancer: a subgroup analysis of the pivotal NAPOLI 3 trial

T Macarulla, RP Cid, MS Womack, AC Gracian, A Zervoudakis, H Hatoum, ...

ESMO open 11 (3), 106043

Eileen O'Reilly
2026

Neoantigen-reactive CD8+ T cell engagement marks exceptional survivors of pancreatic cancer

M Hilmi, JD Schoenfeld, W McKerrow, Y Elhanati, CA O'Connor, S Umeda, ...

bioRxiv, 2026.09. 17.752426

sPARK LabEileen O'ReillyWungki ParkFiyinfolu Balogun
2026

NRG1 fusion-positive solid tumors: clinical detection, genomic landscape, and real-world data in pancreatic cancer

Schram AM, Yang SR, Kahn G, Velasco R, Repetto M, Kinh Gian Do R, DiNapoli S, Sukhadia P, et al.

J Natl Cancer Inst

Eileen O'Reilly
2026

Oncogene Mutations: The Shared Antigen Vaccines That Work?

R Paredes, SD Haldar, S Pant, EM O'Reilly

Annual Review of Medicine 77

Eileen O'Reilly
2026

Organotropic and genomic characterization of pancreatic neuroendocrine carcinoma.

S Wallam, CJ Kinslow, R Thummalapalli, AA Wallam, DP Horowitz, ...

Journal of Clinical Oncology 44 (16_suppl), 4172-4172

sPARK LabEileen O'ReillyWungki Park
2026

Outcomes of First Versus Second-Line Hepatic Artery Infusion Chemotherapy in Unresectable Intrahepatic Cholangiocarcinoma

Nasar N, Armstrong M, Chou JF, Gonen M, Soares KC, Balachandran VP, Drebin JA, Kingham TP, et al.

Ann Surg Oncol

sPARK LabWungki ParkEileen O'Reilly
2026

Pancreatic cancer

Roth S, Apte M, Balachandran VP, Biffi G, Conroy T, Cukierman E, Dotan E, Esposito I, et al.

Nat Rev Dis Primers

Eileen O'Reilly
2026

Pancreatic Cancer—Advances in the Last 50 Years

SG Barreto, A Maitra, EM O'Reilly, D Sahani, R Zheng, CJ Yeo

World journal of surgery

Eileen O'Reilly
2026

Pancreatic cancer: advances in immunology, translational analyses and therapeutic paradigms

O'Reilly EM

Nat Rev Gastroenterol Hepatol

Eileen O'Reilly
2026

Pancreatic cancer: advances in immunology, translational analyses and therapeutic paradigms: Pancreatic cancer in 2025

EM O’Reilly

Nature Reviews Gastroenterology & Hepatology 23 (2), 115-116

Eileen O'Reilly
2026

Pancreatic Cancer: Translating Tumor Biology into Actionability

Balogun FO, Sherman MH, Park W, Soares KC, Reyngold M, Schoenfeld JD, Singhal A, Iacobuzio-Donahue CA, et al.

Cancer Discov

sPARK LabWungki ParkEileen O'ReillyFiyinfolu BalogunJoshua Schoenfeld
2026

Pembrolizumab and olaparib in homologous-recombination-deficient metastatic pancreatic cancer: the phase 2 POLAR trial

W Park, CA O’Connor, JF Chou, M Hilmi, Z Tarcan, C Schwartz, M Larsen, ...

Nature Medicine, 1-11

sPARK LabEileen O'ReillyWungki ParkFiyinfolu Balogun
2026

Pembrolizumab and Olaparib in HRD Metastatic Pancreatic Cancer: The POLAR Trial

Park W (Corresponding Author), O’Reilly E, et al.

Nature Medicine

sPARK LabWungki ParkEileen O'ReillyFiyinfolu BalogunJoshua SchoenfeldMarc HilmiCatherine O'Connor
2026

Physical activity and molecular residual disease in stage III colon cancer: Findings from Cancer and Leukemia Group B (Alliance)/SWOG 80702

GQ Zhang, C Ma, VB Yang, Q Shi, JA Nowak, L Pederson, T Twombly, ...

JNCI: Journal of the National Cancer Institute, djag342

Eileen O'Reilly
2026

POLQ-driven repair scars shape the immunogenic landscape of homologous recombination-deficient pancreatic cancer

Park W, Umeda S, Hilmi M, O'Connor C, Sharma R, Tezcan N, Zhang H, Zhu Y, et al.

bioRxiv

sPARK LabWungki ParkEileen O'ReillyFiyinfolu BalogunMarc HilmiCatherine O'Connor
2026

Precision oncology in pancreatic cancer and future treatment directions

L Al Mahmasani, EM O’Reilly

Surgical Oncology Clinics 35 (1), 145-166

Eileen O'Reilly
2026

Predictive biomarkers of systemic treatment in pancreatic ductal adenocarcinoma: A systematic review and meta-analysis of randomized controlled trials.

CA McIntyre, E Dekker, M Gonen, MG Besselink, MYV Homs, B Mostert, ...

Journal of Clinical Oncology 44 (2_suppl), 770-770

Eileen O'Reilly
2026

Predictive role of circulating tumor DNA in stage III colon cancer treated with celecoxib: a post hoc analysis of the CALGB (Alliance)/SWOG 80702 phase 3 randomized clinical trial

GQ Zhang, JA Meyerhardt, Q Shi, T Twombly, L Pederson, C Ma, ...

JAMA oncology 12 (2), 149-158

Eileen O'Reilly
2026

Prognostic value of CT radiomics in patients with gBRCA1/2 and PALB2 and advanced pancreas cancer.

S Gandhi, J Chakraborty, H Ghahremannezhad, R Do, N Horvat, KH Yu, ...

Cancer Research 86 (7_Supplement), 2776-2776

sPARK LabEileen O'ReillyWungki Park
2026

Quemliclustat and chemotherapy with or without zimberelimab in metastatic pancreatic adenocarcinoma: a randomized phase 1 trial

Wainberg ZA, Manji GA, Bahary N, Ulahannan SV, Pant S, Spigel DR, Uboha NV, Oberstein PE, et al.

Nat Med

Eileen O'Reilly
2026

Radiogenomics and the DNA damage response: opportunities for biomarker-guided radiosensitization in pancreatic cancer

MN Karam, J Hajj, CH Crane, P Ramia, F Geara, N Hamadeh, JG Scott, ...

Frontiers in Oncology 16, 1762867

Eileen O'Reilly
2026

Randomized phase II trial of olaparib and pembrolizumab vs olaparib alone as maintenance therapy in metastatic pancreatic cancer patients with germline BRCA1 or BRCA2 (gBRCA1/2 …

V Chung, KA Guthrie, MJ Pishvaian, AM Lowy, D Sohal, S Colby, ...

Journal of Clinical Oncology 44 (16_suppl), 4012-4012

Eileen O'Reilly
2026

Response to Letter to the Editor:‘NALIRIFOX versus nab-paclitaxel and gemcitabine in older patients with treatment-naive metastatic pancreatic cancer: a subgroup analysis of …

T Macarulla, RP Cid, MS Womack, AC Gracian, A Zervoudakis, H Hatoum, ...

ESMO open 11 (8)

Eileen O'Reilly
2026

Restaging after neoadjuvant FOLFIRINOX for localized pancreatic cancer: a clinical calculator from the Trans-Atlantic Pancreatic Surgery consortium

EN Dekker, D van Klaveren, EMM Verkolf, RF de Wilde, MG Besselink, ...

JNCI: Journal of the National Cancer Institute 118 (6), 1108-1114

Eileen O'Reilly
2026

Safety and Feasibility of Intra-Arterial Treatment of Pancreatic Cancer Using an Emulsion of Ethiodized Oil plus Bumetanide in an Oncopig Model

H Yarmohammadi, SY Son, AWP Maxwell, AS Elsakka, VS Sotirchos, ...

Journal of Vascular and Interventional Radiology 37 (2), 107908

Eileen O'Reilly
2026

Su1848 ENDOSCOPIC ULTRASOUND-GUIDED BIOMARKER EVALUATION OF PANCREATIC CANCER AFTER EXPOSURE TO THERAPY

SE Lee, D Kim, VS Rolston, E Vakiani, C Sigel, EM O’Reilly, K Yu, ...

Gastrointestinal Endoscopy 103 (5), S-2198-S-2199

Eileen O'Reilly
2026

Target Antigen Identification for Antibody Drug Conjugate Therapy in Biliary Tract Cancer

A Dhyani, N Tezcan, JF Chou, Z Tarcan, R Thummalapalli, F Nagib, ...

Clinical Cancer Research

sPARK LabEileen O'ReillyWungki Park
2026

Technical Aspects of Pancreatectomy in the Alliance A021501 Multicenter Clinical Trial of Neoadjuvant Therapy for Pancreatic Cancer: Surgical and Pathologic Documentation

Cardell CF, Segovia D, Prakash LR, Zemla T, Shi Q, Ahmad S, Herman JM, O'Reilly EM, et al.

JCO Oncol Pract

Eileen O'Reilly
2026

The Development of Second-Generation KRAS Inhibitors

EM O’Reilly

Development 24 (4)

Eileen O'Reilly
2026

The OligoPanc project: an interdisciplinary expert consensus statement on oligometastatic pancreatic cancer

CS Leonhardt, M Adham, S Bazarbashi, I Ben-Aharon, RGH Beets-Tan, ...

The Lancet Oncology 27 (3), e141-e149

Eileen O'Reilly
2026

Tracking genomic evolution in ERBB2-altered biliary tract cancer through longitudinal tumor profiling.

OM Fitzpatrick, D Cowzer, R Thummalapalli, J Chou, F Nagib, M Dunphy, ...

Journal of Clinical Oncology 44 (16_suppl), 4137-4137

Eileen O'Reilly
2026

Transcriptomic Plasticity Is a Hallmark of Metastatic Pancreatic Cancer

Jiménez-Sánchez A, Persad S, Hayashi A, Umeda S, Sharma R, Xie Y, Mehta A, Park W, et al.

Cancer Res

sPARK LabWungki ParkEileen O'Reilly
2026

Treating Pancreatic Ductal Adenocarcinoma: The Targeted Revolution is Here

May MS, Park W, O'Reilly EM

Drugs

sPARK LabWungki ParkEileen O'ReillyMichael May
2026